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Fold

fold Variant WHD fold (2000147)
not a true fold: comprises different variants of WHD-like folds due to variations in sizes of the canonical WHD secondary structures and/or insertions of extra structures

Protein Type

Globular proteinsFold into compact units. Soluble in aqueous solutions

Children

Domains PDB ID RegionMethodResolution
Representative CF domain (8004238)
Replication initiation protein

Escherichia coli (562)

 P03856 31-132

Derived from SCOP domain 16125
rasmol icon 1REP C:31-132 X-RAY DIFFRACTION 2.6
Clustered domains

Escherichia coli K-12 (83333)

rasmol icon 2Z9O A:31-132 X-RAY DIFFRACTION 3.14

Escherichia coli K-12 (83333)

rasmol icon 2Z9O B:31-132 Some residues were not observed X-RAY DIFFRACTION 3.14
Representative CF domain (8004239)
Replication initiation protein

Escherichia coli (562)

 P03856 158-246

Derived from SCOP domain 16126
rasmol icon 1REP C:158-246 X-RAY DIFFRACTION 2.6
Clustered domains

Escherichia coli K-12 (83333)

rasmol icon 2Z9O A:158-246 X-RAY DIFFRACTION 3.14

Escherichia coli K-12 (83333)

rasmol icon 2Z9O B:158-246 X-RAY DIFFRACTION 3.14
Representative CF domain (8004241)
Vacuolar protein-sorting-associated protein 25

Saccharomyces cerevisiae (4932)

 P47142 18-125

Derived from SCOP domain 121832
rasmol icon 1XB4 A:18-125 X-RAY DIFFRACTION 3.1
Clustered domains rasmol icon 1U5T C:18-125 X-RAY DIFFRACTION 3.6
rasmol icon 1U5T D:18-125 X-RAY DIFFRACTION 3.6
rasmol icon 1W7P B:18-125 X-RAY DIFFRACTION 3.60
rasmol icon 1W7P C:18-125 X-RAY DIFFRACTION 3.60
rasmol icon 1XB4 B:18-125 X-RAY DIFFRACTION 3.1
rasmol icon 1XB4 C:18-125 X-RAY DIFFRACTION 3.1
rasmol icon 1XB4 D:18-125 X-RAY DIFFRACTION 3.1
Representative CF domain (8004242)
Vacuolar protein-sorting-associated protein 25

Saccharomyces cerevisiae (4932)

 P47142 126-201

Derived from SCOP domain 121833
rasmol icon 1XB4 A:126-201 X-RAY DIFFRACTION 3.1
Clustered domains rasmol icon 1U5T C:126-199 The ends of this domain were trimmed X-RAY DIFFRACTION 3.6
rasmol icon 1U5T D:126-199 The ends of this domain were trimmed X-RAY DIFFRACTION 3.6
rasmol icon 1W7P B:126-199 The ends of this domain were trimmed X-RAY DIFFRACTION 3.60
rasmol icon 1W7P C:126-199 The ends of this domain were trimmed X-RAY DIFFRACTION 3.60
rasmol icon 1XB4 B:126-201 Some residues were not observed X-RAY DIFFRACTION 3.1
rasmol icon 1XB4 C:126-201 X-RAY DIFFRACTION 3.1
rasmol icon 1XB4 D:126-201 Some residues were not observed X-RAY DIFFRACTION 3.1
Representative CF domain (8004247)
Type-2 restriction enzyme FokI

Planomicrobium okeanokoites (244)

 P14870 19-136

Derived from SCOP domain 16134
rasmol icon 2FOK B:15-132 X-RAY DIFFRACTION 2.30
Clustered domains rasmol icon 1FOK A:15-132 X-RAY DIFFRACTION 2.800
rasmol icon 2FOK A:15-132 X-RAY DIFFRACTION 2.30
Representative CF domain (8004248)
Type-2 restriction enzyme FokI

Planomicrobium okeanokoites (244)

 P14870 163-272

Derived from SCOP domain 16135
rasmol icon 2FOK B:159-268 X-RAY DIFFRACTION 2.30
Clustered domains rasmol icon 1FOK A:159-268 X-RAY DIFFRACTION 2.800
rasmol icon 2FOK A:159-268 X-RAY DIFFRACTION 2.30
Representative CF domain (8004269)
ATP-dependent DNA helicase recQ

Escherichia coli (562)

 P15043 411-495

Derived from SCOP domain 93760
rasmol icon 1OYW A:411-495 X-RAY DIFFRACTION 1.8
Clustered domains rasmol icon 1OYY A:411-495 X-RAY DIFFRACTION 2.5
Representative CF domain (8004276)
MHC class II regulatory factor RFX1
complexed with DNA

Homo sapiens (9606)

 P22670 438-513

Derived from SCOP domain 16159
rasmol icon 1DP7 P:1-76 X-RAY DIFFRACTION 1.5
Representative CF domain (8004285)
Lupus La protein
complexed with so4

Homo sapiens (9606)

 P05455 5-92

Derived from SCOP domain 125073
rasmol icon 1ZH5 A:5-92 X-RAY DIFFRACTION 1.85
Clustered domains rasmol icon 1S7A A:5-92 SOLUTION NMR n/a
rasmol icon 1YTY A:6-92 The ends of this domain were trimmed X-RAY DIFFRACTION 2.29
rasmol icon 1YTY B:7-92 The ends of this domain were trimmed X-RAY DIFFRACTION 2.29
rasmol icon 1ZH5 B:6-92 The ends of this domain were trimmed X-RAY DIFFRACTION 1.85
rasmol icon 2VOD A:6-92 The ends of this domain were trimmed X-RAY DIFFRACTION 2.10
rasmol icon 2VOD B:5-92 X-RAY DIFFRACTION 2.10
rasmol icon 2VON A:6-92 The ends of this domain were trimmed X-RAY DIFFRACTION 2.1
rasmol icon 2VON B:7-92 The ends of this domain were trimmed X-RAY DIFFRACTION 2.1
rasmol icon 2VOO A:10-92 The ends of this domain were trimmed X-RAY DIFFRACTION 1.80
rasmol icon 2VOO B:9-92 The ends of this domain were trimmed X-RAY DIFFRACTION 1.80
rasmol icon 2VOP A:8-92 The ends of this domain were trimmed X-RAY DIFFRACTION 2.8
Representative CF domain (8004289)
Methionine aminopeptidase

Pyrococcus furiosus (2261)

 P56218 216-271

Derived from SCOP domain 16216
rasmol icon 1XGS A:216-271 X-RAY DIFFRACTION 1.75
Clustered domains rasmol icon 1WKM A:216-271 X-RAY DIFFRACTION 2.30
rasmol icon 1WKM B:216-271 X-RAY DIFFRACTION 2.30
rasmol icon 1XGM A:216-271 X-RAY DIFFRACTION 2.8
rasmol icon 1XGM B:216-271 X-RAY DIFFRACTION 2.8
rasmol icon 1XGN A:216-271 X-RAY DIFFRACTION 2.9
rasmol icon 1XGN B:216-271 X-RAY DIFFRACTION 2.9
rasmol icon 1XGO A:216-271 X-RAY DIFFRACTION 3.5
rasmol icon 1XGS B:216-271 X-RAY DIFFRACTION 1.75
rasmol icon 2DFI A:216-271 X-RAY DIFFRACTION 2.10
rasmol icon 2DFI B:216-271 X-RAY DIFFRACTION 2.10
Representative CF domain (8004291)
CST complex subunit STN1

Mus musculus (10090)

 Q8K2X3 209-304

Derived from SCOP domain 114692
rasmol icon 1WJ5 A:12-107 SOLUTION NMR n/a
Representative CF domain (8004298)
Regulatory protein AsnC
complexed with asn, mg, mutant

Escherichia coli (562)

 P0ACI6 6-61

Derived from SCOP domain 130417
rasmol icon 2CG4 A:6-61 X-RAY DIFFRACTION 2.40
Clustered domains rasmol icon 2CG4 B:6-61 X-RAY DIFFRACTION 2.40
Representative CF domain (8017516)
Helicase Hel308

Archaeoglobus fulgidus (2234)

PDB PDB 2P6R:A 410-477

Derived from SCOP domain 149270
rasmol icon 2P6R A:410-477 X-RAY DIFFRACTION 3.000